CDS

Accession Number TCMCG017C15753
gbkey CDS
Protein Id OMO92241.1
Location join(106852..106937,107204..107262,107734..107933,108105..108189,108527..108591,108696..109241)
GeneID InterPro:IPR007087
Organism Corchorus olitorius
locus_tag COLO4_17761

Protein

Length 346aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016382.1
Definition Zinc finger, C2H2 [Corchorus olitorius]
Locus_tag COLO4_17761

EGGNOG-MAPPER Annotation

COG_category C
Description ZINC FINGER protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K09201        [VIEW IN KEGG]
ko:K20828        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0002831        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009646        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009788        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0032101        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0047484        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1900150        [VIEW IN EMBL-EBI]
GO:1901000        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901420        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905958        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGATGCAGTTCCCTCATAATCTTTTCGAGAGACGCCCAATTTTCAAATCGAAGGCTCCCGCTGTTAAATGGTTCAAAGAATGGGTTCCCCAAGATGTTGTAGCAACGGGTGGAAAGTGCATGATTTTGAAGTGGGTAAACGAAAACACCTTGAAGGCATTAAAAGAGAAGGAGAAAGAGCCTGAAGCACCAGAGCCTGAACCAGAGCCTACTACTGAAGTTCTTTTCCTTTGCAGCTATGAAGGCTGTGGAAAGACCTTCATTGATGCTGGTGCCTTGAGAAAGCATTCTCACATTCATGGAGAGAGACAATATGTTTGTCATTGGGAGGGTTGTGGGAAGAAATTTTTGGATAGTTCAAAACTGAAACGACATTTTCTCATTCACACCGGAGAAAGAGCTTTTATATGCCCACATGAAGGCTGTGATTGTGGAAAGAGATATGCTCACGAGTACAAGCTGAAAAACCACATTTCATCCCACCATGAAAAGAATGCGACACCAGATGCGCCAAAGTATGTCACACCACCTCCAGAGAAGATAACTAAAACTCCCAAGTCCACTGGGGGTGCCTATGGCTCTGCATCATCTGATCGCCCTTATGCTTGCCCTTATGATGGTTGTGAAAAGGCTTACATACATGAGTACAAACTAAAACTCCATTTAAGGAGAGAGCATCCTGGTCATATGTCGGATGAGAATGTGGAGAATGCCACAGCTAATGTTGACAATGAGATGGACGAAGCCAGCGATCAAGATGCTTATGCTGGGAAGCGAGTCAATGGGAAAAGTCAGAAACAACAAAGCCGGGCAAAACCTAATGTGAAGATGCCCCCTGCCAAAATTGCACGGCAGAAAGGCTCAAGTCCTGCTGCTGCCTCTTTGCCTGTACCTAAAAAACAATGGCCAGTCAAAGAGGAAGTATATGAGGAAGAGGATAGTGAGGAAACTGAGGAAGACCGTGAGAATGTAGAGGATGGATGGAGGTATGGGGAAAACAATGAAGATGACGATGAAGAGACAGAATATGAAGACTAG
Protein:  
MEMQFPHNLFERRPIFKSKAPAVKWFKEWVPQDVVATGGKCMILKWVNENTLKALKEKEKEPEAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQYVCHWEGCGKKFLDSSKLKRHFLIHTGERAFICPHEGCDCGKRYAHEYKLKNHISSHHEKNATPDAPKYVTPPPEKITKTPKSTGGAYGSASSDRPYACPYDGCEKAYIHEYKLKLHLRREHPGHMSDENVENATANVDNEMDEASDQDAYAGKRVNGKSQKQQSRAKPNVKMPPAKIARQKGSSPAAASLPVPKKQWPVKEEVYEEEDSEETEEDRENVEDGWRYGENNEDDDEETEYED